Queries | Columns | Combining query fields | Multiple items per query field | Queries with invalid entries | Long queries | Protein-protein interactions
Package: queryup 1.0.5
queryup: Query the 'UniProtKB' REST API
Retrieve protein information from the 'UniProtKB' REST API (see <https://www.uniprot.org/help/api_queries>).
Authors:
queryup_1.0.5.tar.gz
queryup_1.0.5.zip(r-4.7-any)queryup_1.0.5.zip(r-4.6-any)queryup_1.0.5.zip(r-4.5-any)
queryup_1.0.5.tgz(r-4.6-any)queryup_1.0.5.tgz(r-4.5-any)
queryup_1.0.5.tar.gz(r-4.7-any)queryup_1.0.5.tar.gz(r-4.6-any)
queryup_1.0.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
queryup/json (API)
| # Install 'queryup' in R: |
| install.packages('queryup', repos = c('https://voisinneg.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/voisinneg/queryup/issues
Datasets:
- query_fields - Available query fields.
- return_fields - Available return fields ("columns").
- uniprot_entries - Information for 1000 UniProt entries from the organism Mus musculus
Last updated from:efbbd06dab. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 194 | ||
| source / vignettes | OK | 303 | ||
| linux-release | OK | 184 | ||
| macos-release | OK | 196 | ||
| macos-oldrel | OK | 275 | ||
| windows-devel | OK | 119 | ||
| windows-release | OK | 123 | ||
| windows-oldrel | OK | 116 | ||
| wasm-release | OK | 125 |
Exports:get_uniprot_dataquery_uniprot
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Accessory function used to build the query url | build_query_url |
| Accessory function removing invalid values from a query | clean_query |
| Retrieve data from UniProt using UniProt's REST API | get_uniprot_data |
| Accessory function retrieving invalid values from messages returned by the UniProt API. | parse_messages |
| Available query fields. | query_fields |
| Retrieve data from UniProt using UniProt's REST API. | query_uniprot |
| Available return fields ("columns"). | return_fields |
| Information for 1000 UniProt entries from the organism Mus musculus | uniprot_entries |